CDWAgent

BaranziniLab/CDWAgent
★ 0 stars Python Code/Dev Tools Updated today
MCP server for a de-identified Epic Caboodle Clinical Data Warehouse (SQL Server, read-only). BioRouter extension, sibling of UCSFOMOPAgent.
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Quick Install

Copy the config for your editor. Some servers may need additional setup — check the README.

Add to claude_desktop_config.json:

{
  "mcpServers": {
    "cdwagent": {
      "command": "uvx",
      "args": [
        "cdwagent"
      ]
    }
  }
}

Or install with pip: pip install cdwagent

README Excerpt

An MCP (Model Context Protocol) server that exposes a de-identified **Epic Caboodle Clinical Data Warehouse** (SQL Server) to [**BioRouter**](https://github.com/BaranziniLab/BioRouter). Built for clinical researchers who need natural-language access to EHR data without writing SQL. Designed as a sibling of [UCSFOMOPAgent](https://github.com/BaranziniLab/UCSFOMOPAgent): CDWAgent targets the UF Epic Caboodle schema while OMOPAgent targets the OHDSI/OMOP common data model. Both can be enabled in th

Tools (20)

CDWCDW_LOG_LEVELCDW_NAMESPACECDW_NEWCDW_SCHEMACLINICAL_RECORDS_DATABASECLINICAL_RECORDS_PASSWORDCLINICAL_RECORDS_SERVERCLINICAL_RECORDS_USERNAMEClinicalQueryValidatorINFOUCSFOMOPAgentbuild_cohortcohort_summarycrossmap_patientdeid_ufdescribe_tableexport_query_to_csvget_database_overviewget_diagnoses