bioimage-mcp-server gives your LLM agents high-level access to microscopy data by wrapping Bio-Formats and common image-understanding tasks in a MCP server
Quick Install
Copy the config for your editor. Some servers may need additional setup — check the README.
Claude Desktop
Claude Code
Cursor
Add to claude_desktop_config.json:
{
"mcpServers": {
"bioimage-mcp-server": {
"command": "npx",
"args": [
"-y",
"Ichoran/bioimage-mcp-server"
]
}
}
}📋 Copy
Run in terminal:
claude mcp add bioimage-mcp-server npx -y Ichoran/bioimage-mcp-server📋 Copy
Add to .cursor/mcp.json:
{
"mcpServers": {
"bioimage-mcp-server": {
"command": "npx",
"args": [
"-y",
"Ichoran/bioimage-mcp-server"
]
}
}
}📋 Copy