bioportal-term-mcp

metadatacenter/bioportal-term-mcp

★ 0 stars Python 🌐 Browser/Web Updated 1d ago

MCP server that resolves free-text descriptions of BioPortal ontologies, classes, and value sets into the IRI/acronym/name tuples needed by the CEDAR artifact library's controlled-term-field builders.

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Quick Install

Copy the config for your editor. Some servers may need additional setup — check the README.

Add to claude_desktop_config.json:

{
  "mcpServers": {
    "bioportal-term-mcp": {
      "command": "uvx",
      "args": [
        "bioportal-term-mcp"
      ]
    }
  }
}

Or install with pip: pip install bioportal-term-mcp

README Excerpt

A focused [Model Context Protocol](https://modelcontextprotocol.io/) server that resolves free-text descriptions of [BioPortal](https://bioportal.bioontology.org/) ontologies, classes, and value sets into the canonical `(IRI, acronym, name, ...)` tuples required by the controlled-term-field builders.

Tools (2)

BIOPORTAL_API_KEYget_ontology

bioportal-term-mcp

Quick Install

README Excerpt

Tools (2)

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