breedsim-mcp

musharna/breedsim-mcp
★ 0 stars Python API Integration Updated today
MCP server for breeding-scheme simulation (AlphaSimR) — returns distributions, never a single stochastic run
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Quick Install

Copy the config for your editor. Some servers may need additional setup — check the README.

Add to claude_desktop_config.json:

{
  "mcpServers": {
    "breedsim-mcp": {
      "command": "uvx",
      "args": [
        "breedsim-mcp"
      ]
    }
  }
}

Or install with pip: pip install breedsim-mcp

README Excerpt

**Breeding-scheme simulation over MCP — returns distributions, never a single stochastic run.** Drives [AlphaSimR](https://github.com/gaynorr/AlphaSimR) so an agent can ask what a selection programme would actually gain, with one structural rule: **a single simulation run is not a result, and this API will not return one.**

Tools (11)

difference_indistinguishableno_linkage_disequilibriumnondeterministic_foundersoverlap_but_differentprediction_accuracy_lowquickHaploreplicates_too_fewrunMacssession_idthreads_not_pinnedvariance_exhausted

Topics

alphasimrbreeding-simulationmcpmodel-context-protocolplant-breedingquantitative-geneticsrreproducibilitysimulation