★ 0 stars
Python
🌐 Browser/Web
Updated today
Plant genomics MCP server — 32 tools across 11 backends (Ensembl Plants, Phytozome, UniProt, Europe PMC, QuickGO, NCBI BLAST, Gramene, KEGG, STRING-DB, ATTED-II, BAR) + cross-source synthesis. stdio + Streamable-HTTP transports.
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Quick Install
Copy the config for your editor. Some servers may need additional setup — check the README.
Add to claude_desktop_config.json:
{
"mcpServers": {
"plant-genomics-mcp": {
"command": "uvx",
"args": [
"plant-genomics-mcp"
]
}
}
}
Run in terminal:
claude mcp add plant-genomics-mcp uvx plant-genomics-mcp
Add to .cursor/mcp.json:
{
"mcpServers": {
"plant-genomics-mcp": {
"command": "uvx",
"args": [
"plant-genomics-mcp"
]
}
}
}
Or install with pip: pip install plant-genomics-mcp
README Excerpt
> **32 tools** for plant-genomics locus lookup over the Model Context Protocol — > 16 single-locus + 12 parallel-batch + 4 cross-source synthesis variants. > Free, public sources: Ensembl Plants, Phytozome BioMart, UniProtKB, > Europe PMC, QuickGO, NCBI BLAST, Gramene, KEGG, STRING-DB, ATTED-II, > and BAR (Bio-Analytic Resource for Plant Biology).
Tools (20)
PLANT_GENOMICS_MCP_BLAST_CONCURRENCYPLANT_GENOMICS_MCP_CACHE_DISABLEDPLANT_GENOMICS_MCP_CACHE_SIZEPLANT_GENOMICS_MCP_CACHE_TTLPLANT_GENOMICS_MCP_HTTP_HOSTPLANT_GENOMICS_MCP_HTTP_JSONPLANT_GENOMICS_MCP_HTTP_MAX_BODYPLANT_GENOMICS_MCP_HTTP_PORTPLANT_GENOMICS_MCP_HTTP_STATELESSPLANT_GENOMICS_MCP_HTTP_TOKENPLANT_GENOMICS_MCP_NCBI_EMAILanalyze_locusatted_coexpressionbar_aiv_interactionsbar_efp_expressionbar_gene_summarybiological_contextblast_sequenceensembl_plants_lookup_locusfind_homologs