ncbi-datasets-mcp-server

An MCP server for NCBI Datasets command line tools which allows for the searching and fetching of NCBI Taxonomy, Gene, Genome, and Viral data. Note: this project is not affiliated with NCBI or the NCBI Datasets team.

{
  "mcpServers": {
    "ncbi-datasets-mcp-se": {
      "command": "uvx",
      "args": [
        "ncbi-datasets-mcp-server"
      ]
    }
  }
}

claude mcp add ncbi-datasets-mcp-se uvx ncbi-datasets-mcp-server

{
  "mcpServers": {
    "ncbi-datasets-mcp-se": {
      "command": "uvx",
      "args": [
        "ncbi-datasets-mcp-server"
      ]
    }
  }
}